New Bulk Data Files
The following bulk files have been added to the downloads page with the FB2025_04 release of FlyBase:
Aberrations - gene deletion/duplication data
Split system combinations
Human disease model reports
Single Cell RNA-Seq Metadata
Gene model status and annotation comments
Antibody information
Disease-implicated variants
Gene relationship comments
InterPro signatures
Representative publications
Chemical Synonyms
Curated Expression
A description of the contents and format of each file is found here.
New Metabolic Pathway Reports
New metabolic reports include the GLUCOSYLCERAMIDE BIOSYNTHESIS, the GPI-ANCHOR PROTEIN BIOSYNTHESIS and the DOLICHYL PHOSPHATE BIOSYNTHESIS pathways.
New Gene Group Reports
This release includes the mitochondrial complexes: MITOCHONDRIAL INNER MEMBRANE PEPTIDASE COMPLEX, MITOCHONDRIAL DEGRADOSOME and MITOCHONDRIAL PROCESSING PEPTIDASE. New family gene groups include, SPECTRINS and SINGLE VON WILLEBRAND FACTOR TYPE C DOMAIN PROTEINS.
Fly BLAST at the Alliance of Genome Resources
The Alliance of Genome Resources website has ‘beta’ released their new BLAST service, with Fly and Worm database sets. The fly database set comes from FlyBase, and will be updated with each FlyBase release. You can find a link to this BLAST service at FlyBase under Tools → Genomics Tools (see below), or you can go to the Alliance website and find a link under Data and Tools:
On the Alliance BLAST Service page, select the Fly BLAST link to go to the service page.